Protein ZmNAC55 | |
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Information | |
TF Name: | ZmNAC55 |
Species: | Maize |
TF Family: | NAC |
Gene Name(Synonym): | NACTF55 |
Uniprot ID: | A0A1D6PDQ1 |
ZmNAC55 is a protein in the NAC family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.
Overview of domains present in v5 transcripts | |
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PF02365 | |
Zm00001eb041350_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
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Zm00001d032182 | DAPseq | sequence | fimo | position | |
Zm00001d032182 | DAPseq | sequence | fimo | position | |
Zm00001d032182 | ChIPseq | sequence | fimo | position | |
Zm00001d032182 | PChIPseq | sequence | fimo | position |
MEERNGTNMEKSDEILMPGFRFHPTDEELVSFYLKRKVQQKPISIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDR
KYRNSVRPNRVTAAGFWKATGTDRPIYSSEGTKCVGLKKSLVFYKGRAARGMKTDWMMHEFRLPSLADPSLPKRPIDKTI
PLNDSWTICRIFKKTSSLAQRALSHTWGPPLLGATEADDMINALQSVQASEFALESSLQVAPAAPAAGQFSSRHGLHVHG
QHQQKKGTNSPSLDGSSSCKLINFTSSSPSEEGRPQSLSFPVTFPFEVQGTHKTAAAAPVFFGAHPDHHLGGFVVDSSAD
VNGGIVGGRSQDSSTRKPSNNGFSTSSGDWETAGRVSFPFDLGADSSEEWRCNIPWESLLTPAAVQAELLPH
MEERNGTNMEKSDEILMPGFRFHPTDEELVSFYLKRKVQQKPISIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDR
KYRNSVRPNRVTAAGFWKATGTDRPIYSSEGTKCVGLKKSLVFYKGRAARGMKTDWMMHEFRLPSLADPSLPKRPIDKTI
PLNDSWTICRIFKKTSSLAQRALSHTWGPPLLGATEADDMINALQSVQASEFALESSLQVAPAAPAAGQFSSRHGLHVHG
QHQQKKGTNSPSLDGSSSCKLINFTSSSPSEEGRPQSLSFPVTFPFEVQGTHKTAAAAPVFFGAHPDHHLGGFVVDSSAD
VNGGIVGGRSQDSSTRKPSNNGFSTSSGDWETAGRVSFPFDLGADSSEEWRCNIPWESLLTPAAVQAELLPH
MEERNGTNMEKSDEILMPGFRFHPTDEELVSFYLKRKVQQKPISIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDR
KYRNSVRPNRVTAAGFWKATGTDRPIYSSEGTKCVGLKKSLVFYKGRAARGMKTDWMMHEFRLPSLADPSLPKRPIDKTI
PLNDSWTICRIFKKTSSLAQRALSHTWGPPLLGATEADDMINALQSVQASEFALESSLQVAPAAPAAGQFSSRHGLHVHG
QHQQKKGTNSPSLDGSSSCKLINFTSSSPSEEGRPQSLSFPVTFPFEVQGTHKTAAAAPVFFGAHPDHHLGGFVVDSSAD
VNGGIVGGRSQDSSTRKPSNNGFSTSSGDWETAGRVSFPFDLGADSSEEWRCNIPWESLLTPAAVQAELLPH
MEERNGTNMEKSDEILMPGFRFHPTDEELVSFYLKRKVQQKPISIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDR
KYRNSVRPNRVTAAGFWKATGTDRPIYSSEGTKCVGLKKSLVFYKGRAARGMKTDWMMHEFRLPSLADPSLPKRPIDKTI
PLNDSWTICRIFKKTSSLAQRALSHTWGPPLLGATEADDMINALQSVQASEFALESSLQVAPAAPAAGQFSSRHGLHVHG
QHQQKKGTNSPSLDGSSSCKLINFTSSSPSEEGRPQSLSFPVTFPFEVQGTHKTAAAAPVFFGAHPDHHLGGFVVDSSAD
VNGGIVGGRSQDSSTRKPSNNGFSTSSGDWETAGRVSFPFDLGADSSEEWRCNIPWESLLTPAAVQAELLPH
MEERNGTNMEKSDEILMPGFRFHPTDEELVSFYLKRKVQQKPISIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDR
KYRNSVRPNRVTAAGFWKATGTDRPIYSSEGTKCVGLKKSLVFYKGRAARGMKTDWMMHEFRLPSLADPSLPKRPIDKTI
PLNDSWTICRIFKKTSSLAQRALSHTWGPPLLGATEADDMINALQSVQASEFALESSLQVAPAAPAAGQFSSRHGLHVHG
QHQQKKGTNSPSLDGSSSCKLINFTSSSPSEEGRPQSLSFPVTFPFEVQGTHKTAAAAPVFFGAHPDHHLGGFVVDSSAD
VNGGIVGGRSQDSSTRKPSNNGFSTSSGDWETAGRVSFPFDLGADSSEEWRCNIPWESLLTPAAVQAELLPH
Secondary Structure Color Code | |
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BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF02365 |
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Hover here to show all domains |
CAGTTCTTGGGTGTTGTCTTCACCT...
CAGTTCTTGGGTGTTGTCTTCACCTCAGCAGCTTCATCCCAGAAAGCCATTCACAAGATACCTTGTAAGTTTGTAACCAGGAGCAAGCAGGGGCTTCATCGCTTTAGTTTGCAAGGTATGGAGGAGAGGAATGGCACCAACATGGAGAAGTCAGATGAGATCCTGATGCCGGGTTTCCGGTTTCATCCCACCGACGAAGAGCTGGTCAGTTTCTACCTCAAGAGGAAGGTCCAGCAAAAGCCTATCTCCATCGAGCTGATCAGGCAGCTGGACATATACAAGTACGACCCGTGGGATCTCCCAAAGCTTGCGAGCACCGGTGAGAAGGAGTGGTACTTCTACTGCCCAAGGGATCGGAAATACCGCAACAGCGTAAGACCAAACAGAGTGACGGCAGCCGGTTTCTGGAAGGCCACAGGGACAGACAGGCCGATCTACTCCTCCGAGGGCACCAAGTGCGTGGGCCTGAAGAAGTCCCTCGTGTTCTACAAAGGGAGAGCGGCGAGAGGGATGAAGACCGACTGGATGATGCACGAGTTCAGGCTCCCTTCGCTCGCCGATCCCTCGCTCCCCAAGCGTCCGATCGACAAGACCATTCCACTCAATGACTCGTGGACTATCTGTAGGATCTTCAAGAAAACCAGTTCGCTGGCGCAACGAGCGCTGTCGCACACCTGGGGGCCCCCACTGCTGGGGGCAACAGAGGCAGATGATATGATCAACGCGTTGCAGTCAGTGCAGGCTTCAGAATTCGCTCTCGAGAGCTCACTGCAGGTTGCACCGGCTGCGCCTGCAGCAGGCCAGTTCAGCAGCAGGCATGGCTTGCATGTTCATGGCCAGCACCAGCAGAAGAAGGGTACCAACAGCCCGTCTCTGGACGGCTCCTCCTCATGCAAGCTCATCAACTTCACCAGCAGCAGCCCATCCGAGGAGGGACGACCCCAGAGCTTGAGCTTCCCAGTCACCTTCCCCTTTGAAGTGCAAGGGACGCACAAGACTGCAGCCGCCGCGCCAGTCTTCTTCGGCGCGCATCCTGATCATCACCTCGGTGGGTTCGTTGTCGACTCTTCTGCCGATGTCAATGGCGGCATCGTCGGTGGCAGGAGCCAGGACTCGTCCACCAGGAAGCCCAGCAATAATGGCTTCAGCACCAGCAGCGGTGACTGGGAAACTGCGGGGAGGGTCAGCTTCCCTTTTGATCTGGGTGCAGATTCTTCAGAGGAGTGGAGGTGCAACATACCCTGGGAGTCCTTGCTGACCCCGGCTGCTGTCCAGGCTGAGCTGCTGCCACACTAGGGCAGGGCAGCGGCATTTAGCAATTGCATTGCATTACGGAGAGTATCTCATAGGTTTACATGTACAGTCTACAGGTGCTGTGAGTGTGAGTTTCCTTCATCTGTTAGCATTTCTGTTAGCTGCAGAAACATTTTTTTTTGGTTCAGTTTTGGTTAGGAATGCCATGTACATACCACGAGCTATGTAGCATTGTTAACAGCAAAGCTAACAGAGAGAAGGAAC
MEERNGTNMEKSDEILMPGFRFHPTDEELVSFYLKRKVQQKPISIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDR
KYRNSVRPNRVTAAGFWKATGTDRPIYSSEGTKCVGLKKSLVFYKGRAARGMKTDWMMHEFRLPSLADPSLPKRPIDKTI
PLNDSWTICRIFKKTSSLAQRALSHTWGPPLLGATEADDMINALQSVQASEFALESSLQVAPAAPAAGQFSSRHGLHVHG
QHQQKKGTNSPSLDGSSSCKLINFTSSSPSEEGRPQSLSFPVTFPFEVQGTHKTAAAAPVFFGAHPDHHLGGFVVDSSAD
VNGGIVGGRSQDSSTRKPSNNGFSTSSGDWETAGRVSFPFDLGADSSEEWRCNIPWESLLTPAAVQAELLPH
TGTCTTCACCTCAGCAGCTTCATCC...
TGTCTTCACCTCAGCAGCTTCATCCCAGAAAGCCATTCACAAGATACCTTGTAAGTTTGTAACCAGGAGCAAGCAGGGGCTTCATCGCTTTAGTTTGCAAGGTATGGAGGAGAGGAATGGCACCAACATGGAGAAGTCAGATGAGATCCTGATGCCGGGTTTCCGGTTTCATCCCACCGACGAAGAGCTGGTCAGTTTCTACCTCAAGAGGAAGGTCCAGCAAAAGCCTATCTCCATCGAGCTGATCAGGCAGCTGGACATATACAAGTACGACCCGTGGGATCTCCCAAAGCTTGCGAGCACCGGTGAGAAGGAGTGGTACTTCTACTGCCCAAGGGATCGGAAATACCGCAACAGCGTAAGACCAAACAGAGTGACGGCAGCCGGTTTCTGGAAGGCCACAGGGACAGACAGGCCGATCTACTCCTCCGAGGGCACCAAGTGCGTGGGCCTGAAGAAGTCCCTCGTGTTCTACAAAGGGAGAGCGGCGAGAGGGATGAAGACCGACTGGATGATGCACGAGTTCAGGCTCCCTTCGCTCGCCGATCCCTCGCTCCCCAAGCGTCCGATCGACAAGACCATTCCACTCAATGACTCGTGGACTATCTGTAGGATCTTCAAGAAAACCAGTTCGCTGGCGCAACGAGCGCTGTCGCACACCTGGGGGCCCCCACTGCTGGGGGCAACAGAGGCAGATGATATGATCAACGCGTTGCAGTCAGTGCAGGCTTCAGAATTCGCTCTCGAGAGCTCACTGCAGGTTGCACCGGCTGCGCCTGCAGCAGGCCAGTTCAGCAGCAGGCATGGCTTGCATGTTCATGGCCAGCACCAGCAGAAGAAGGGTACCAACAGCCCGTCTCTGGACGGCTCCTCCTCATGCAAGCTCATCAACTTCACCAGCAGCAGCCCATCCGAGGAGGGACGACCCCAGAGCTTGAGCTTCCCAGTCACCTTCCCCTTTGAAGTGCAAGGGACGCACAAGACTGCAGCCGCCGCGCCAGTCTTCTTCGGCGCGCATCCTGATCATCACCTCGGTGGGTTCGTTGTCGACTCTTCTGCCGATGTCAATGGCGGCATCGTCGGTGGCAGGAGCCAGGACTCGTCCACCAGGAAGCCCAGCAATAATGGCTTCAGCACCAGCAGCGGTGACTGGGAAACTGCGGGGAGGGTCAGCTTCCCTTTTGATCTGGGTGCAGATTCTTCAGAGGAGTGGAGGTGCAACATACCCTGGGAGTCCTTGCTGACCCCGGCTGCTGTCCAGGCTGAGCTGCTGCCACACTAGGGCAGGGCAGCGGCATTTAGCAATTGCATTGCATTACGGAGAGTATCTCATAGTGTGAGTTTCCTTCATCTGTTAGCATTTCTGTTAGCTGCAGAAACATTTTTTTTTGGTTCAGTTTTGGTTAGGAATGCCATGTACATACCACGAGCTATGTAGCATTGTTAACAGCAAAGCTAACAGAGAGAAGGAACCTTGTGTTGTACGTACACTATTCAGCTCTTTGAATACTTCAGTGCA
MEERNGTNMEKSDEILMPGFRFHPTDEELVSFYLKRKVQQKPISIELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDR
KYRNSVRPNRVTAAGFWKATGTDRPIYSSEGTKCVGLKKSLVFYKGRAARGMKTDWMMHEFRLPSLADPSLPKRPIDKTI
PLNDSWTICRIFKKTSSLAQRALSHTWGPPLLGATEADDMINALQSVQASEFALESSLQVAPAAPAAGQFSSRHGLHVHG
QHQQKKGTNSPSLDGSSSCKLINFTSSSPSEEGRPQSLSFPVTFPFEVQGTHKTAAAAPVFFGAHPDHHLGGFVVDSSAD
VNGGIVGGRSQDSSTRKPSNNGFSTSSGDWETAGRVSFPFDLGADSSEEWRCNIPWESLLTPAAVQAELLPH
ATGGAGGAGAGGAATGGCACCAACA...
ATGGAGGAGAGGAATGGCACCAACATGGAGAAGTCAGATGAGATCCTGATGCCGGGTTTCCGGTTTCATCCCACCGACGAAGAGCTGGTCAGTTTCTACCTCAAGAGGAAGGTCCAGCAAAAGCCTATCTCCATCGAGCTGATCAGGCAGCTGGACATATACAAGTACGACCCGTGGGATCTCCCAAAGCTTGCGAGCACCGGTGAGAAGGAGTGGTACTTCTACTGCCCAAGGGATCGGAAATACCGCAACAGCGTAAGACCAAACAGAGTGACGGCAGCCGGTTTCTGGAAGGCCACAGGGACAGACAGGCCGATCTACTCCTCCGAGGGCACCAAGTGCGTGGGCCTGAAGAAGTCCCTCGTGTTCTACAAAGGGAGAGCGGCGAGAGGGATGAAGACCGACTGGATGATGCACGAGTTCAGGCTCCCTTCGCTCGCCGATCCCTCGCTCCCCAAGCGTCCGATCGACAAGACCATTCCACTCAATGACTCGTGGACTATCTGTAGGATCTTCAAGAAAACCAGTTCGCTGGCGCAACGAGCGCTGTCGCACACCTGGGGGCCCCCACTGCTGGGGGCAACAGAGGCAGATGATATGATCAACGCGTTGCAGTCAGTGCAGGCTTCAGAATTCGCTCTCGAGAGCTCACTGCAGGTTGCACCGGCTGCGCCTGCAGCAGGCCAGTTCAGCAGCAGGCATGGCTTGCATGTTCATGGCCAGCACCAGCAGAAGAAGGGTACCAACAGCCCGTCTCTGGACGGCTCCTCCTCATGCAAGCTCATCAACTTCACCAGCAGCAGCCCATCCGAGGAGGGACGACCCCAGAGCTTGAGCTTCCCAGTCACCTTCCCCTTTGAAGTGCAAGGGACGCACAAGACTGCAGCCGCCGCGCCAGTCTTCTTCGGCGCGCATCCTGATCATCACCTCGGTGGGTTCGTTGTCGACTCTTCTGCCGATGTCAATGGCGGCATCGTCGGTGGCAGGAGCCAGGACTCGTCCACCAGGAAGCCCAGCAATAATGGCTTCAGCACCAGCAGCGGTGACTGGGAAACTGCGGGGAGGGTCAGCTTCCCTTTTGATCTGGGTGCAGATTCTTCAGAGGAGTGGAGGTGCAACATACCCTGGGAGTCCTTGCTGACCCCGGCTGCTGTCCAGGCTGAGCTGCTGCCACACTAG
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